MetaCyc Pathway: stachyose degradation in Sinorhizobium meliloti 1021

Add experiment(s):


Reactions and Genes Cobalt chloride 0.16 mM
remove
Alpha-galactosidase:
stachyose + H2O→α-D-galactopyranose + raffinose
(EC 3.2.1.22)
SM_b21643 +0.1
SM_b21648 -0.2
raffinose + H2O→α-D-galactopyranose + sucrose
SM_b21643 +0.1
SM_b21648 -0.2
Galactokinase:
α-D-galactopyranose + ATP→α-D-galactose 1-phosphate + ADP + H+
(EC 2.7.1.6)
No genes
UDP-glucose--hexose-1-phosphate uridylyltransferase:
α-D-galactose 1-phosphate + UDP-α-D-glucose→UDP-α-D-galactose + α-D-glucopyranose 1-phosphate
(EC 2.7.7.12)
No genes
UTP--hexose-1-phosphate uridylyltransferase:
α-D-galactose 1-phosphate + H+ + UTP→UDP-α-D-galactose + diphosphate
(EC 2.7.7.10; 2.7.7.64)
No genes
UTP-monosaccharide-1-phosphate uridylyltransferase:
α-D-glucopyranose 1-phosphate + H+ + UTP→UDP-α-D-glucose + diphosphate
(EC 2.7.7.64; 2.7.7.9)
SM_b20960 +0.0
SMc04023 +0.0
UDP-glucose 4-epimerase (in reverse):
UDP-α-D-galactose→UDP-α-D-glucose
(EC 5.1.3.2)
SM_b20245 -0.1
SM_b20459 +0.0
SM_b20942 -0.2
SM_b21060 +0.0
SM_b21228 +0.0
SMa0715 +0.2
SMc00430 +0.0
SMc01324 +0.3
SMc02252 +0.2
SMc03963 +1.5
SMc04145 -0.2

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information