MetaCyc Pathway: photorespiration II in Sinorhizobium meliloti 1021

Reactions and Genes	L-Lysine (C)
D-ribulose-1,5-bisphosphate + dioxygen→2-phosphoglycolate + 3-phospho-D-glycerate + 2 H+
SM_b20198	-1.7
Phosphoglycolate phosphatase: 2-phosphoglycolate + H2O→glycolate + phosphate (EC 3.1.3.18)
SMc00079	+0.2
SMc00151	-0.5
SMc00893	+0.3
SMc01276	+0.1
SMc04299	+0.1
Glycolate dehydrogenase: glycolate[in] + an electron-transfer quinone→glyoxylate[in] + an electron-transfer quinol (EC 1.1.99.14)
SMc00832	-0.1
SMc00833	-0.0
SMc00926	-0.3
Glycine transaminase (in reverse): glyoxylate + L-glutamate→glycine + 2-oxoglutarate (EC 2.6.1.4)
No genes
Serine--glyoxylate transaminase: glyoxylate + L-serine→glycine + 3-hydroxypyruvate (EC 2.6.1.45)
SMa1495	-0.1
SMa2139	-0.1
glycine + NAD+ + a tetrahydrofolate→a 5,10-methylenetetrahydrofolate + ammonium + CO2 + NADH (EC 1.4.1.27)
SMc02487	N.D.
Glycerate dehydrogenase (in reverse): 3-hydroxypyruvate + NADH + H+→D-glycerate + NAD+ (EC 1.1.1.29)
SM_b20535	+0.2
SMa2137	-0.1
SMc00340	-0.2
SMc00641	-4.3
SMc01943	+0.1
SMc02849	-0.3
D-glycerate + ATP→2-phospho-D-glycerate + ADP + H+ (EC 2.7.1.165)
No genes
Glycine hydroxymethyltransferase (in reverse): glycine + a 5,10-methylenetetrahydrofolate + H2O→L-serine + a tetrahydrofolate (EC 2.1.2.1)
SMa2135	-0.2
SMc01770	-3.6
2-phospho-D-glycerate→3-phospho-D-glycerate (EC 5.4.2.12)
SMc02838	-8.0

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information