MetaCyc Pathway: Rubisco shunt in Sinorhizobium meliloti 1021

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Reactions and Genes L-Lysine (C)
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Transketolase (in reverse):
β-D-fructofuranose 6-phosphate + D-glyceraldehyde 3-phosphate→D-erythrose 4-phosphate + D-xylulose 5-phosphate (EC 2.2.1.1)
SM_b20200 -0.6
SMc00269 -0.1
SMc00270 +0.0
SMc02342 +0.0
SMc03978 -4.6
Transaldolase (in reverse):
D-erythrose 4-phosphate + β-D-fructofuranose 6-phosphate→D-glyceraldehyde 3-phosphate + D-sedoheptulose 7-phosphate (EC 2.2.1.2)
SMc02495 -0.5
Transketolase:
D-sedoheptulose 7-phosphate + D-glyceraldehyde 3-phosphate→D-xylulose 5-phosphate + D-ribose 5-phosphate (EC 2.2.1.1)
SM_b20200 -0.6
SMc00269 -0.1
SMc00270 +0.0
SMc02342 +0.0
SMc03978 -4.6
Ribose-5-phosphate isomerase:
D-ribose 5-phosphate→D-ribulose 5-phosphate (EC 5.3.1.6)
SM_b20371 +0.4
SMc00152 N.D.
SMc01613 +0.3
Ribulose-phosphate 3-epimerase (in reverse):
D-xylulose 5-phosphate→D-ribulose 5-phosphate (EC 5.1.3.1)
SM_b20195 -0.2
SMc00511 -0.8
Phosphoribulokinase:
D-ribulose 5-phosphate + ATP→D-ribulose-1,5-bisphosphate + ADP + H+ (EC 2.7.1.19)
SM_b20201 -0.3
Ribulose-bisphosphate carboxylase (in reverse):
D-ribulose-1,5-bisphosphate + CO2 + H2O→2 3-phospho-D-glycerate + 2 H+ (EC 4.1.1.39)
SM_b20197 -1.5
SM_b20198 -1.7
SM_b20393 +0.0
3-phospho-D-glycerate→2-phospho-D-glycerate (EC 5.4.2.12)
SMc02838 -8.0
Phosphopyruvate hydratase:
2-phospho-D-glycerate→phosphoenolpyruvate + H2O (EC 4.2.1.11)
SMc01028 -7.7
Pyruvate kinase (in reverse):
phosphoenolpyruvate + ADP + H+→pyruvate + ATP (EC 2.7.1.40)
SMc04005 +0.2

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information