MetaCyc Pathway: L-arabinose degradation III in Burkholderia phytofirmans PsJN

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Reactions and Genes L-Arabinose (C)
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L-arabinofuranose→L-arabinopyranose (spontaneous)
No genes
α-L-arabinopyranose + NAD(P)+→L-arabinono-1,4-lactone + NAD(P)H + H+ (EC 1.1.1.376)
No genes
L-arabinonolactonase:
L-arabinono-1,4-lactone + H2O→L-arabinonate + H+ (EC 3.1.1.15)
BPHYT_RS16915 -2.0
L-arabinonate dehydratase:
L-arabinonate→2-dehydro-3-deoxy-L-pentonate + H2O (EC 4.2.1.25)
BPHYT_RS19730 -2.8
2-dehydro-3-deoxy-L-arabinonate dehydratase:
2-dehydro-3-deoxy-L-pentonate→2,5-dioxopentanoate + H2O (EC 4.2.1.43)
BPHYT_RS22715 -2.5
2,5-dioxovalerate dehydrogenase:
2,5-dioxopentanoate + NAD(P)+ + H2O→2-oxoglutarate + NAD(P)H + 2 H+ (EC 1.2.1.26)
BPHYT_RS10925 -3.0
BPHYT_RS19710 -1.8
BPHYT_RS24140 -0.3
BPHYT_RS28455 +0.1
BPHYT_RS28770 +0.6

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information