MetaCyc Pathway: superpathway of putrescine biosynthesis in Klebsiella michiganensis M5al

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Reactions and Genes RCH2_defined_1percent_glucose with Chloride 600 mM and Betaine 100 uM
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Arginine decarboxylase:
L-arginine + H+→agmatine + CO2 (EC 4.1.1.19)
BWI76_RS24030 -0.1
Arginase:
L-arginine + H2O→L-ornithine + urea (EC 3.5.3.1)
No genes
Agmatinase:
agmatine + H2O→putrescine + urea (EC 3.5.3.11)
BWI76_RS21880 +0.2
BWI76_RS21925 +0.2
BWI76_RS24025 -0.5
Ornithine decarboxylase:
L-ornithine + H+→putrescine + CO2 (EC 4.1.1.17)
BWI76_RS24175 -2.6

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information