| Reactions and Genes | rhizosphere EcoFAB sample 3; outgrowth in LB |
|---|
| remove |
| gallate + dioxygen→2-pyrone-4,6-dicarboxylate + H+ + H2O |
| BWI76_RS13285 | N.D. |
| BWI76_RS13290 | +0.1 |
2-pyrone-4,6-dicarboxylate lactonase:
2-pyrone-4,6-dicarboxylate + H2O→(1E)-4-oxobut-1-ene-1,2,4-tricarboxylate + H+ (EC 3.1.1.57) |
| No genes |
| (1E)-4-oxobut-1-ene-1,2,4-tricarboxylate→(1E,3E)-4-hydroxybuta-1,3-diene-1,2,4-tricarboxylate (spontaneous) (EC 5.3.2.8) |
| BWI76_RS04370 | -1.6 |
| BWI76_RS14180 | +0.6 |
4-oxalmesaconate hydratase (in reverse):
(1E,3E)-4-hydroxybuta-1,3-diene-1,2,4-tricarboxylate + H2O→2-hydroxy-4-oxobutane-1,2,4-tricarboxylate (EC 4.2.1.83) |
| BWI76_RS14190 | +0.4 |
4-hydroxy-4-methyl-2-oxoglutarate aldolase:
2-hydroxy-4-oxobutane-1,2,4-tricarboxylate→oxaloacetate + pyruvate (EC 4.1.3.17) |
| BWI76_RS14185 | +0.6 |
Links:
Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information