MetaCyc Pathway: superpathway of anaerobic energy metabolism (invertebrates) in Pseudomonas fluorescens FW300-N2E3

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Reactions and Genes L-Ornithine
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Phosphoenolpyruvate carboxykinase (GTP) (in reverse):
phosphoenolpyruvate + CO2 + GDP→oxaloacetate + GTP (EC 4.1.1.32)
No genes
Pyruvate kinase (in reverse):
phosphoenolpyruvate + ADP + H+→pyruvate + ATP (EC 2.7.1.40)
AO353_01940 +0.5
AO353_03775 -0.3
Phosphoenolpyruvate carboxykinase (GTP) (in reverse):
phosphoenolpyruvate + CO2 + IDP→oxaloacetate + ITP (EC 4.1.1.32)
No genes
Alanine transaminase (in reverse):
pyruvate + L-glutamate→2-oxoglutarate + L-alanine (EC 2.6.1.2)
AO353_03235 -0.1
AO353_19150 +0.1
Alanine racemase:
L-alanine→D-alanine (EC 5.1.1.1; 5.1.1.10)
AO353_09145 N.D.
Aspartate transaminase:
2-oxoglutarate + L-aspartate→L-glutamate + oxaloacetate (EC 2.6.1.1)
AO353_01120 -0.4
AO353_01210 -1.5
AO353_01655 +0.1
AO353_02295 +0.2
AO353_09180 +0.2
AO353_09990 +0.2
AO353_15915 +0.0
AO353_17700 +0.3
AO353_18575 -0.0
AO353_19150 +0.1
AO353_20995 -0.1
AO353_22840 -0.2
AO353_22920 +1.8
AO353_23080 -0.1
AO353_24850 +0.1
AO353_26890 +0.0
AO353_28150 +0.6
AO353_29325 -0.6
Malate dehydrogenase (in reverse):
oxaloacetate + NADH + H+→(S)-malate + NAD+ (EC 1.1.1.37; 1.1.1.38)
No genes
Malate dehydrogenase (oxaloacetate-decarboxylating):
(S)-malate + NAD+→pyruvate + CO2 + NADH (EC 1.1.1.38)
No genes
Fumarate hydratase:
(S)-malate→fumarate + H2O (EC 4.2.1.2)
AO353_02150 +0.4
AO353_03795 +0.4
pyruvate + coenzyme A + NAD+→CO2 + acetyl-CoA + NADH (EC 1.2.1.104)
AO353_12860 N.D.
AO353_19955 -0.1
Succinate dehydrogenase (ubiquinone) (in reverse):
fumarate[in] + a rhodoquinol→succinate[in] + a rhodoquinone (EC 1.3.5.1)
No genes
acetyl-CoA + succinate→acetate + succinyl-CoA (EC 2.8.3.18)
No genes
succinate + propanoyl-CoA→succinyl-CoA + propanoate (EC 2.8.3.27)
No genes
Methylmalonyl-CoA mutase (in reverse):
succinyl-CoA→(R)-methylmalonyl-CoA (EC 5.4.99.2)
No genes
Succinate--CoA ligase (ADP-forming) (in reverse):
succinyl-CoA + ADP + phosphate→succinate + ATP + coenzyme A (EC 6.2.1.5)
AO353_01815 N.D.
AO353_01820 N.D.
Methylmalonyl-CoA epimerase:
(R)-methylmalonyl-CoA→(S)-methylmalonyl-CoA (EC 5.1.99.1)
No genes
Propionyl-CoA carboxylase (in reverse):
(S)-methylmalonyl-CoA + ADP + H+ + phosphate→propanoyl-CoA + ATP + hydrogen carbonate (EC 6.4.1.3)
AO353_16540 N.D.
AO353_20670 N.D.

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information