MetaCyc Pathway: fatty acid salvage in Pseudomonas fluorescens SBW25-INTG

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Reactions and Genes p-Coumaric (C) and Ammonium chloride (N); with MOPS
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Butyrate--CoA ligase:
decanoate + ATP + coenzyme A→decanoyl-CoA + AMP + diphosphate (EC 6.2.1.2; 6.2.1.3)
PFLU_RS17185 +0.2
PFLU_RS21255 +0.1
PFLU_RS23680 -3.8
PFLU_RS23685 +0.0
decanoyl-CoA + an oxidized electron-transfer flavoprotein + H+→(2E)-dec-2-enoyl-CoA + a reduced electron-transfer flavoprotein (EC 1.3.8.7)
PFLU_RS02225 -0.1
PFLU_RS09195 -0.2
PFLU_RS16060 +0.2
PFLU_RS26520 -0.2
PFLU_RS27605 -2.4
PFLU_RS27610 +0.1
PFLU_RS27620 -3.6
Long-chain-enoyl-CoA hydratase (in reverse):
(2E)-dec-2-enoyl-CoA + H2O→(S)-3-hydroxydecanoyl-CoA (EC 4.2.1.74)
PFLU_RS07105 -0.0
PFLU_RS07650 -4.7
PFLU_RS08485 +0.0
PFLU_RS10835 +0.0
PFLU_RS12025 +0.1
PFLU_RS24260 -0.1
3-hydroxyacyl-CoA dehydrogenase:
(S)-3-hydroxydecanoyl-CoA + NAD+→3-oxodecanoyl-CoA + NADH + H+ (EC 1.1.1.35)
PFLU_RS07650 -4.7
PFLU_RS11090 -0.2
PFLU_RS22840 +0.0
Acetyl-CoA C-acyltransferase (in reverse):
3-oxodecanoyl-CoA + coenzyme A→octanoyl-CoA + acetyl-CoA (EC 2.3.1.16)
PFLU_RS03225 -0.0
PFLU_RS06735 -4.6
PFLU_RS07655 -4.7
PFLU_RS10575 -0.1
PFLU_RS14765 -0.1
PFLU_RS16065 +0.2
PFLU_RS17190 -0.5
PFLU_RS21180 -0.0
PFLU_RS22845 -0.3
octanoyl-CoA + a malonyl-[acp] + H+→a 3-oxodecanoyl-[acp] + CO2 + coenzyme A (EC 2.3.1.207)
PFLU_RS22260 +0.1

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information