MetaCyc Pathway: indole-3-acetate biosynthesis VI (bacteria) in Pseudomonas fluorescens FW300-N2E2

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Reactions and Genes Cobalt chloride 0.6 mM
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Aspartate transaminase:
L-tryptophan + 2-oxoglutarate→(indol-3-yl)pyruvate + L-glutamate (EC 2.6.1.1; 2.6.1.27)
Pf6N2E2_1496 -0.5
Pf6N2E2_2127 -0.8
Pf6N2E2_2446 +0.0
Pf6N2E2_2632 -0.1
Pf6N2E2_3173 -0.3
Pf6N2E2_4288 +0.3
Pf6N2E2_4386 -0.4
Pf6N2E2_462 +0.1
Pf6N2E2_5300 -1.3
Pf6N2E2_5813 -0.5
Pf6N2E2_5890 -0.1
Pf6N2E2_5891 N.D.
Pf6N2E2_5895 +0.0
Pf6N2E2_5989 +1.7
Pf6N2E2_637 -0.1
Pf6N2E2_684 -0.0
Indolepyruvate decarboxylase:
(indol-3-yl)pyruvate + H+→(indol-3-yl)acetaldehyde + CO2 (EC 4.1.1.74)
No genes
Indole-3-acetaldehyde oxidase:
(indol-3-yl)acetaldehyde + dioxygen + H2O→(indol-3-yl)acetate + hydrogen peroxide + H+ (EC 1.2.3.7)
No genes

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information