MetaCyc Pathway: aerobic respiration II (cytochrome c) (yeast) in Pseudomonas fluorescens FW300-N2E2

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Reactions and Genes Cobalt chloride 0.6 mM
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NADH[in] + H+[in] + a ubiquinone→a ubiquinol + NAD+[in] (EC 1.6.5.9)
Pf6N2E2_5132 +1.4
Pf6N2E2_594 -0.2
Succinate dehydrogenase (ubiquinone):
succinate[in] + a ubiquinone→a ubiquinol + fumarate[in]
(EC 1.3.5.1)
Pf6N2E2_5853 N.D.
a ubiquinol + 2 an oxidized c-type cytochrome[out] + 2 H+[in]→2 a reduced c-type cytochrome[out] + 4 H+[out] + a ubiquinone (EC 7.1.1.8)
No genes
4 a reduced c-type cytochrome[out] + dioxygen[in] + 8 H+[in]→2 H2O[in] + 4 an oxidized c-type cytochrome[out] + 4 H+[out] (EC 7.1.1.9)
Pf6N2E2_1254 +0.2
Pf6N2E2_1858 -0.1
Pf6N2E2_1871 -0.3
Pf6N2E2_2305 +0.1
Pf6N2E2_2306 -0.2
Pf6N2E2_2307 N.D.
Pf6N2E2_2308 -0.5
Pf6N2E2_2310 -0.5
Pf6N2E2_2311 -0.2
Pf6N2E2_2312 +1.1
Pf6N2E2_2313 -0.2
Pf6N2E2_4098 -0.1
Pf6N2E2_4099 +0.0
Pf6N2E2_4101 +0.0

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information