MetaCyc Pathway: ethene biosynthesis V (engineered) in Paraburkholderia graminis OAS925

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Reactions and Genes RCH2_defined_glucose_5mM with Adenine 5 mM
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2 H2O[in] + hν[cytosol] + 2 a plastoquinone + 4 H+[out]→2 a plastoquinol + dioxygen[in] + 4 H+[in] (EC 1.10.3.9)
No genes
a plastoquinol + 2 an oxidized plastocyanin[in] + 2 H+[out]→2 a reduced plastocyanin[in] + a plastoquinone + 4 H+[in] (EC 7.1.1.6)
No genes
a reduced plastocyanin[in] + hν[cytosol] + an oxidized ferredoxin [iron-sulfur] cluster[out]→a reduced ferredoxin [iron-sulfur] cluster[out] + an oxidized plastocyanin[in] (EC 1.97.1.12)
No genes
Ferredoxin--NADP(+) reductase:
2 a reduced ferredoxin [iron-sulfur] cluster[out] + NADP+[out] + H+[out]→NADPH[out] + 2 an oxidized ferredoxin [iron-sulfur] cluster[out] (EC 1.18.1.2)
ABIE53_000451 N.D.
ABIE53_002877 +0.1
Glyceraldehyde-3-phosphate dehydrogenase (NADP(+)) (phosphorylating) (in reverse):
3-phospho-D-glyceroyl phosphate + NADPH + H+→D-glyceraldehyde 3-phosphate + NADP+ + phosphate (EC 1.2.1.13)
No genes
Triose-phosphate isomerase:
D-glyceraldehyde 3-phosphate→glycerone phosphate (EC 5.3.1.1)
ABIE53_001588 -2.2
Fructose-bisphosphate aldolase (in reverse):
glycerone phosphate + D-glyceraldehyde 3-phosphate→β-D-fructofuranose 1,6-bisphosphate (EC 4.1.2.13)
ABIE53_003426 +0.9
ABIE53_005502 +0.4
ABIE53_005987 +0.0
Fructose-bisphosphate aldolase (in reverse):
glycerone phosphate + D-erythrose 4-phosphate→D-sedoheptulose 1,7-bisphosphate (EC 4.1.2.13)
ABIE53_003426 +0.9
ABIE53_005502 +0.4
ABIE53_005987 +0.0
Fructose-bisphosphatase:
β-D-fructofuranose 1,6-bisphosphate + H2O→β-D-fructofuranose 6-phosphate + phosphate (EC 3.1.3.11)
ABIE53_003219 N.D.
ABIE53_005499 +0.3
Sedoheptulose-bisphosphatase:
D-sedoheptulose 1,7-bisphosphate + H2O→D-sedoheptulose 7-phosphate + phosphate (EC 3.1.3.37)
No genes
Transketolase:
D-sedoheptulose 7-phosphate + D-glyceraldehyde 3-phosphate→D-ribose 5-phosphate + D-xylulose 5-phosphate (EC 2.2.1.1)
ABIE53_003537 N.D.
ABIE53_004775 +0.1
ABIE53_004776 +0.2
ABIE53_004986 +0.2
ABIE53_004987 +0.7
ABIE53_005501 +0.3
ABIE53_005965 +0.1
Transketolase (in reverse):
β-D-fructofuranose 6-phosphate + D-glyceraldehyde 3-phosphate→D-xylulose 5-phosphate + D-erythrose 4-phosphate (EC 2.2.1.1)
ABIE53_003537 N.D.
ABIE53_004775 +0.1
ABIE53_004776 +0.2
ABIE53_004986 +0.2
ABIE53_004987 +0.7
ABIE53_005501 +0.3
ABIE53_005965 +0.1
Ribose-5-phosphate isomerase:
D-ribose 5-phosphate→D-ribulose 5-phosphate (EC 5.3.1.6)
ABIE53_001942 N.D.
Ribulose-phosphate 3-epimerase (in reverse):
D-xylulose 5-phosphate→D-ribulose 5-phosphate (EC 5.1.3.1)
ABIE53_003638 +1.5
ABIE53_005503 -0.4
Phosphoribulokinase:
D-ribulose 5-phosphate + ATP→D-ribulose-1,5-bisphosphate + ADP + H+ (EC 2.7.1.19)
ABIE53_005500 +0.0
Ribulose-bisphosphate carboxylase (in reverse):
D-ribulose-1,5-bisphosphate + CO2 + H2O→2 3-phospho-D-glycerate + 2 H+ (EC 4.1.1.39)
ABIE53_005308 +0.0
ABIE53_005496 +0.3
ABIE53_005497 -1.2
ABIE53_006094 +0.2
3-phospho-D-glycerate→2-phospho-D-glycerate (EC 5.4.2.12)
ABIE53_000663 -2.9
ABIE53_003496 -0.2
Phosphoglycerate kinase:
3-phospho-D-glycerate + ATP→3-phospho-D-glyceroyl phosphate + ADP (EC 2.7.2.3)
ABIE53_003428 -2.5
Phosphopyruvate hydratase:
2-phospho-D-glycerate→H2O + phosphoenolpyruvate (EC 4.2.1.11)
ABIE53_002762 -3.0
Phosphoenolpyruvate carboxylase (in reverse):
phosphoenolpyruvate + hydrogen carbonate→oxaloacetate + phosphate (EC 4.1.1.31)
ABIE53_001314 -1.4
Citrate (Si)-synthase:
oxaloacetate + H2O + acetyl-CoA→citrate + coenzyme A + H+ (EC 2.3.3.1; 2.3.3.16; 2.3.3.3)
ABIE53_003333 -0.1
ABIE53_004770 N.D.
Aconitate hydratase:
citrate→H2O + cis-aconitate (EC 4.2.1.3)
ABIE53_004757 N.D.
ABIE53_004758 N.D.
ABIE53_005043 +1.8
Aconitate hydratase:
cis-aconitate + H2O→D-threo-isocitrate (EC 4.2.1.3)
ABIE53_004757 N.D.
ABIE53_004758 N.D.
ABIE53_005043 +1.8
Isocitrate dehydrogenase (NADP(+)):
D-threo-isocitrate + NADP+→CO2 + NADPH + 2-oxoglutarate (EC 1.1.1.42)
ABIE53_003317 -0.9
ABIE53_004441 N.D.
2-oxoglutarate + dioxygen + 2 H+→3 CO2 + H2O + ethene (EC 1.13.12.19)
No genes

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information