MetaCyc Pathway: C4 photosynthetic carbon assimilation cycle, NAD-ME type in Pantoea sp. MT58

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Reactions and Genes Ying_AminoAcid20 rep C; time point 3
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Carbonate dehydratase (in reverse):
CO2 + H2O→hydrogen carbonate + H+ (EC 4.2.1.1)
IAI47_02970 -0.1
IAI47_13105 N.D.
IAI47_15685 -0.3
Phosphoenolpyruvate carboxylase (in reverse):
hydrogen carbonate + phosphoenolpyruvate→oxaloacetate + phosphate (EC 4.1.1.31)
IAI47_00895 -0.2
Aspartate transaminase (in reverse):
oxaloacetate + L-glutamate→L-aspartate + 2-oxoglutarate (EC 2.6.1.1)
IAI47_00100 -0.0
IAI47_01085 +0.1
IAI47_01110 +0.1
IAI47_03280 -0.1
IAI47_03285 -0.2
IAI47_06185 -0.1
IAI47_06350 -0.1
IAI47_09620 -0.1
IAI47_12765 +0.3
IAI47_16465 +0.2
IAI47_18095 -0.0
IAI47_19280 +0.3
IAI47_19310 +0.1
L-aspartate[in]→L-aspartate[out]
No genes
Aspartate transaminase:
L-aspartate + 2-oxoglutarate→oxaloacetate + L-glutamate (EC 2.6.1.1)
IAI47_00100 -0.0
IAI47_01085 +0.1
IAI47_01110 +0.1
IAI47_03280 -0.1
IAI47_03285 -0.2
IAI47_06185 -0.1
IAI47_06350 -0.1
IAI47_09620 -0.1
IAI47_12765 +0.3
IAI47_16465 +0.2
IAI47_18095 -0.0
IAI47_19280 +0.3
IAI47_19310 +0.1
Malate dehydrogenase (in reverse):
oxaloacetate + NADH + H+→(S)-malate + NAD+ (EC 1.1.1.37; 1.1.1.38)
IAI47_02520 -1.4
IAI47_06755 -1.6
Malate dehydrogenase (oxaloacetate-decarboxylating):
(S)-malate + NAD+→CO2 + pyruvate + NADH (EC 1.1.1.38)
IAI47_06755 -1.6
Alanine transaminase (in reverse):
pyruvate + L-glutamate→L-alanine + 2-oxoglutarate (EC 2.6.1.2)
IAI47_05575 -0.0
IAI47_06350 -0.1
L-alanine[in]→L-alanine[out]
No genes
Alanine transaminase (in reverse):
L-alanine + 2-oxoglutarate→pyruvate + L-glutamate (EC 2.6.1.2)
IAI47_06350 -0.1
Pyruvate, phosphate dikinase:
pyruvate + ATP + phosphate→phosphoenolpyruvate + AMP + diphosphate + H+ (EC 2.7.9.1)
No genes

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information