MetaCyc Pathway: L-serine degradation in Pseudomonas fluorescens FW300-N2E2

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Reactions and Genes RCH2 defined with Cobalt chloride 0.04 mM
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L-serine ammonia-lyase:
L-serine→2-aminoprop-2-enoate + H2O (EC 4.3.1.17)
Pf6N2E2_4685 -0.4
Pf6N2E2_5557 +0.2
Tryptophanase:
2-aminoprop-2-enoate→2-iminopropanoate (spontaneous) (EC 4.1.99.1; 4.1.99.2; 4.3.1.13; 4.3.1.17; 4.3.1.18; 4.3.3.8; 4.4.1.1; 4.4.1.13; 4.4.1.15; 4.4.1.25; 4.4.1.28; 4.4.1.35; 4.5.1.2)
Pf6N2E2_2047 +0.7
Pf6N2E2_3918 +1.6
Pf6N2E2_4685 -0.4
Pf6N2E2_5557 +0.2
Pf6N2E2_5896 +0.1
2-iminopropanoate + H2O→pyruvate + ammonium (spontaneous) (EC 3.5.99.10; 4.1.99.1; 4.1.99.2; 4.3.1.13; 4.3.1.17; 4.3.1.18; 4.3.3.8; 4.4.1.1; 4.4.1.13; 4.4.1.15; 4.4.1.25; 4.4.1.28; 4.4.1.35; 4.5.1.2)
Pf6N2E2_2047 +0.7
Pf6N2E2_3918 +1.6
Pf6N2E2_4360 -2.4
Pf6N2E2_4685 -0.4
Pf6N2E2_5557 +0.2
Pf6N2E2_5896 +0.1

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information