Fitness data for Xcc-8004.5407.1 in Xanthomonas campestris pv. campestris strain 8004

GTPase and tRNA-U34 5-formylation enzyme TrmE
SEED: GTPase and tRNA-U34 5-formylation enzyme TrmE
KEGG: tRNA modification GTPase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
carbon source Citric Acid 16.67 mM (C) -3.5 -3.4 compare
carbon source Citric Acid 10mM (C) -2.8 -3.8 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X -2.5 -3.5 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X -1.6 -1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X -1.6 -1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.4 -2.3 compare
in planta xylem Xylemvessel barcodes Location 3 6 dpi (25 plantes) -1.3 -1.9 compare
in planta 1664 hydathodes 6 dpi (Dna extract from 8 * 208 hydathodes and pooled together) -1.2 -2.4 compare
in planta xylem Xylemvessel barcodes Location 2 4 dpi (25 plantes) -1.1 -2.5 compare
in planta xylem Xylemvessel barcodes T1L3P4 -1.1 -1.7 compare
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=2_days -1.0 -2.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.9 -1.3 compare
in planta xylem Xylemvessel barcodes Location 3 4 dpi (25 plantes) -0.9 -1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.9 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.9 +1.5 compare
carbon source D-Glucose 16.67 mM (C) +0.9 +3.0 compare
carbon source Pectin from apple 2 g/L (C) +1.0 +2.9 compare
carbon source D-Fructose 16.67 mM (C) +1.1 +3.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.4 +3.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.8 +3.7 compare