Fitness data for Xcc-8004.5010.1 in Xanthomonas campestris pv. campestris strain 8004

tRNA dihydrouridine synthase A
SEED: tRNA dihydrouridine synthase A
KEGG: tRNA-dihydrouridine synthase A

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
clovis xylem sap Clovis xylem sap -0.5 -2.5 compare
xantho_mme_glucose_casamino Xantho_MME_glucose_casamino -0.4 -2.8 compare
control PBS control -0.4 -2.3 compare
xantho_mme_glucose_casamino Xantho_MME_glucose_casamino -0.4 -2.3 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X -0.3 -1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X -0.3 -1.5 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X -0.3 -1.3 compare
supernatant Supernatant; Xanthomonas campestris pv. campestris (strain 8004) grown in 0.1x TSB, 0.4x -0.3 -1.7 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -0.3 -1.5 compare
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days +0.3 +1.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +1.2 compare
in planta xylem Xylemvessel barcodes Location 3 4 dpi (25 plantes) +0.4 +1.6 compare
carbon source Pectin from apple 2 g/L (C) +0.4 +2.1 compare
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=2_days +0.4 +2.4 compare
in planta xylem Xylemvessel barcodes Location 3 4 dpi (25 plantes) +0.4 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +2.2 compare
in planta 1664 hydathodes 6 dpi (Dna extract from 8 * 208 hydathodes and pooled together) +0.5 +2.7 compare
in planta xylem Xylemvessel barcodes Location 2 4 dpi (25 plantes) +0.5 +2.5 compare
carbon source Citric Acid 16.67 mM (C) +0.6 +2.6 compare
carbon source D-Glucose 16.67 mM (C) +0.7 +4.2 compare