Fitness data for Xcc-8004.4930.1 in Xanthomonas campestris pv. campestris strain 8004

RNA-2',3'-PO4:RNA-5'-OH ligase
SEED: RNA-2',3'-PO4:RNA-5'-OH ligase
KEGG: protein RtcB

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.3 -1.4 compare
in planta xylem Xylemvessel barcodes Location 2 6 dpi (25 plantes) -0.3 -1.3 compare
in planta xylem Xylemvessel barcodes Location 3 6 dpi (25 plantes) -0.2 -1.0 compare
control PBS control -0.2 -1.2 compare
in planta xylem Xylemvessel barcodes Location 2 6 dpi (25 plantes) -0.2 -0.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.2 -1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.2 +1.0 compare
carbon source D-Fructose 16.67 mM (C) +0.2 +1.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.2 +1.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.2 +1.0 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X +0.2 +1.1 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X +0.2 +1.2 compare
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=2_days +0.2 +1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +1.5 compare
in planta 1664 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together) +0.3 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.4 +1.6 compare
in planta xylem Xylemvessel barcodes Location 2 4 dpi (25 plantes) +0.4 +2.1 compare
in planta xylem Xylemvessel barcodes Location 3 6 dpi (25 plantes) +0.6 +2.3 compare