Fitness data for Xcc-8004.4719.1 in Xanthomonas campestris pv. campestris strain 8004

Diguanylate cyclase (GGDEF domain) with GAF sensor
SEED: Diguanylate cyclase (GGDEF domain) with GAF sensor

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
in planta xylem Xylemvessel barcodes T0L1P4 -1.4 -2.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.8 -1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -0.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.5 -0.9 compare
in planta xylem Xylemvessel barcodes Location 3 6 dpi (25 plantes) -0.5 -0.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.4 -0.9 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -0.4 -1.3 compare
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=2_days +0.4 +1.4 compare
xantho_mme_glucose_dropout_lth Xantho_MME_glucose_dropout_LTH +0.4 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.0 compare
in planta 1648 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together) +0.4 +0.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +1.2 compare
in planta xylem Xylemvessel barcodes Location 3 6 dpi (25 plantes) +0.5 +1.0 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X +0.5 +2.0 compare
supernatant Supernatant; Pseudomonas fluorescens CFPB 13502 grown in 0.1x TSB, 0.4x +0.5 +1.6 compare
in planta xylem Xylemvessel barcodes Location 2 6 dpi (25 plantes) +0.5 +2.1 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X +0.5 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.5 +1.2 compare
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days +0.7 +1.3 compare
in planta xylem Xylemvessel barcodes Location 2 4 dpi (25 plantes) +1.1 +2.6 compare