Fitness data for Xcc-8004.4441.1 in Xanthomonas campestris pv. campestris strain 8004

Tyrosine recombinase XerD
SEED: Tyrosine recombinase XerD
KEGG: integrase/recombinase XerD

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.1)


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group condition fitness t score  
in planta xylem Xylemvessel barcodes T0L1P3 -3.3 -3.9 compare
in planta 1648 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together) -2.2 -2.1 compare
in planta 1600 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together) -2.1 -4.1 compare
supernatant Supernatant; Xanthomonas campestris pv. campestris (strain 8004) grown in 0.1x TSB, 0.4x -2.0 -4.2 compare
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days -1.8 -2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.8 -3.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.5 -2.8 compare
in planta xylem Xylemvessel barcodes Location 2 4 dpi (25 plantes) -1.5 -2.7 compare
supernatant Supernatant; Xanthomonas campestris pv. campestris (strain 8004) and Pseudomonas fluorescens CFPB 13502 grown in 0.1x TSB, 0.4x -1.4 -3.4 compare
in planta 1664 hydathodes 6 dpi (Dna extract from 8 * 208 hydathodes and pooled together) -1.3 -3.1 compare
r2a control R2A control -1.3 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.3 -2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.3 -2.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.3 -3.0 compare
in planta xylem Xylemvessel barcodes Location 2 6 dpi (25 plantes) -1.2 -3.1 compare
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days -1.2 -2.2 compare
in planta xylem Xylemvessel barcodes Location 2 6 dpi (25 plantes) -1.2 -2.8 compare
supernatant Supernatant; Pseudomonas fluorescens CFPB 13502 grown in 0.1x TSB, 0.4x -1.1 -3.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.1 -2.7 compare
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=2_days -1.1 -2.9 compare