Fitness data for Xcc-8004.4256.1 in Xanthomonas campestris pv. campestris strain 8004

Transcriptional regulator for ferulate or vanillate catabolism
SEED: Transcriptional regulator for ferulate or vanillate catabolism
KEGG: GntR family transcriptional regulator, vanillate catabolism transcriptional regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.9 -2.7 compare
in planta 1648 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together) -1.6 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.9 -1.2 compare
in planta xylem Xylemvessel barcodes T1L3P4 -0.8 -1.8 compare
in planta xylem Xylemvessel barcodes Location 2 4 dpi (25 plantes) -0.8 -1.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.7 -1.5 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X -0.6 -1.1 compare
xantho_mme_glucose_dropout_lth Xantho_MME_glucose_dropout_LTH -0.5 -1.0 compare
in planta xylem Xylemvessel barcodes T0L2P4 -0.5 -0.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.5 -0.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.6 +1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.7 +1.8 compare
in planta 1600 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together) +0.7 +2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 +1.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.8 +1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.9 +2.3 compare
in planta xylem Xylemvessel barcodes Location 2 6 dpi (25 plantes) +0.9 +2.0 compare
in planta xylem Xylemvessel barcodes T0L1P3 +0.9 +1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.0 +1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.4 +1.6 compare