Fitness data for Xcc-8004.4253.1 in Xanthomonas campestris pv. campestris strain 8004

Transcriptional regulator, LysR family
SEED: Transcriptional regulator, LysR family
KEGG: LysR family transcriptional regulator, pca operon transcriptional activator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
in planta xylem Xylemvessel barcodes Location 3 4 dpi (25 plantes) -2.7 -1.7 compare
in planta xylem Xylemvessel barcodes T0L2P4 -2.0 -2.1 compare
in planta 1648 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together) -1.7 -1.3 compare
in planta 1600 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together) -1.5 -1.4 compare
carbon source D-Glucose 16.67 mM (C) -1.1 -2.3 compare
in planta 1664 hydathodes 6 dpi (Dna extract from 8 * 208 hydathodes and pooled together) -0.9 -0.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.9 -1.0 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X -0.8 -0.9 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X +0.8 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.8 +1.2 compare
xantho_mme_glucose_casamino Xantho_MME_glucose_casamino +0.9 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.9 +2.1 compare
xantho_mme_glucose_casamino Xantho_MME_glucose_casamino +0.9 +3.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.9 +0.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.2 +1.5 compare
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days +1.2 +1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.3 +1.7 compare
r2a control R2A control +1.3 +1.9 compare
in planta xylem Xylemvessel barcodes Location 3 6 dpi (25 plantes) +1.3 +2.0 compare
in planta xylem Xylemvessel barcodes Location 3 6 dpi (25 plantes) +1.7 +2.8 compare