Fitness data for Xcc-8004.3963.1 in Xanthomonas campestris pv. campestris strain 8004

Penicillin-insensitive transglycosylase (EC 2.4.2.-) & transpeptidase PBP-1C
SEED: Penicillin-insensitive transglycosylase (EC 2.4.2.-) & transpeptidase PBP-1C
KEGG: penicillin-binding protein 1C

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days -0.9 -2.2 compare
in planta xylem Xylemvessel barcodes T0L1P4 -0.9 -2.5 compare
in planta xylem Xylemvessel barcodes T0L1P3 -0.5 -1.5 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X -0.5 -1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X -0.5 -1.7 compare
clovis xylem sap Clovis xylem sap -0.3 -1.9 compare
clovis xylem sap Clovis xylem sap -0.3 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -1.2 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -0.3 -1.6 compare
in planta xylem Xylemvessel barcodes Location 3 6 dpi (25 plantes) +0.3 +0.8 compare
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=2_days +0.3 +1.7 compare
supernatant Supernatant; Xanthomonas campestris pv. campestris (strain 8004) and Pseudomonas fluorescens CFPB 13502 grown in 0.1x TSB, 0.4x +0.3 +1.5 compare
carbon source Citric Acid 10mM (C) +0.3 +1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.1 compare
in planta xylem Xylemvessel barcodes Location 2 6 dpi (25 plantes) +0.4 +1.4 compare
control PBS control +0.4 +1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +1.7 compare
supernatant Supernatant; Pseudomonas fluorescens CFPB 13502 grown in 0.1x TSB, 0.4x +0.4 +1.8 compare
clovis xylem sap Clovis xylem sap +0.5 +2.1 compare
in planta xylem Xylemvessel barcodes T0L2P4 +0.6 +2.4 compare