Fitness data for Xcc-8004.3741.1 in Xanthomonas campestris pv. campestris strain 8004

Type III effector HrpW, hairpin with pectate lyase domain
SEED: Type III effector HrpW, hairpin with pectate lyase domain

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


Add gene:

Or see all 98 experiments or choose conditions

group condition fitness t score  
in planta 1664 hydathodes 6 dpi (Dna extract from 8 * 208 hydathodes and pooled together) -1.1 -3.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.1 -1.7 compare
in planta 1664 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together) -0.9 -2.6 compare
clovis xylem sap Clovis xylem sap -0.9 -3.1 compare
in planta 1648 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together) -0.9 -1.5 compare
carbon source Citric Acid 16.67 mM (C) -0.9 -2.3 compare
in planta 1600 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together) -0.8 -2.1 compare
in planta xylem Xylemvessel barcodes Location 2 4 dpi (25 plantes) -0.8 -2.2 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X -0.7 -1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X -0.7 -2.0 compare
in planta xylem Xylemvessel barcodes Location 2 4 dpi (25 plantes) -0.7 -1.9 compare
in planta xylem Xylemvessel barcodes Location 2 6 dpi (25 plantes) -0.6 -1.8 compare
r2a control R2A control -0.6 -1.5 compare
carbon source Citric Acid 10mM (C) -0.6 -1.4 compare
supernatant Supernatant; Pseudomonas fluorescens CFPB 13502 grown in 0.1x TSB, 0.4x +0.6 +2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.6 +1.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 +0.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.7 +1.2 compare
in planta xylem Xylemvessel barcodes Location 3 4 dpi (25 plantes) +0.8 +1.7 compare