Fitness data for Xcc-8004.3739.1 in Xanthomonas campestris pv. campestris strain 8004

Type III secretion protein HrpE
SEED: Type III secretion protein HrpE

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days -1.3 -1.5 compare
carbon source Citric Acid 16.67 mM (C) -1.0 -1.6 compare
in planta 1600 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together) -0.8 -1.7 compare
in planta xylem Xylemvessel barcodes Location 3 4 dpi (25 plantes) -0.8 -1.4 compare
in planta xylem Xylemvessel barcodes T0L2P4 -0.7 -1.4 compare
in planta xylem Xylemvessel barcodes Location 3 6 dpi (25 plantes) -0.7 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.6 -1.1 compare
supernatant Supernatant; Xanthomonas campestris pv. campestris (strain 8004) and Pseudomonas fluorescens CFPB 13502 grown in 0.1x TSB, 0.4x -0.6 -1.8 compare
in planta xylem Xylemvessel barcodes Location 2 6 dpi (25 plantes) +0.6 +1.9 compare
in planta xylem Xylemvessel barcodes Location 2 6 dpi (25 plantes) +0.7 +1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 +1.3 compare
in planta xylem Xylemvessel barcodes Location 3 4 dpi (25 plantes) +0.7 +1.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.9 +1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X +1.0 +3.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.0 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.1 +3.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.2 +1.6 compare
in planta 1648 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together) +1.3 +3.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +1.3 +2.2 compare