Fitness data for Xcc-8004.3395.1 in Xanthomonas campestris pv. campestris strain 8004

Transcriptional regulator, GntR family
SEED: Transcriptional regulator, GntR family
KEGG: GntR family transcriptional regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 2.7)


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group condition fitness t score  
in planta xylem Xylemvessel barcodes Location 2 4 dpi (25 plantes) -4.1 -2.8 compare
in planta xylem Xylemvessel barcodes Location 3 6 dpi (25 plantes) -4.0 -2.7 compare
in planta xylem Xylemvessel barcodes Location 2 4 dpi (25 plantes) -3.6 -2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -3.6 -3.3 compare
in planta xylem Xylemvessel barcodes Location 3 6 dpi (25 plantes) -3.6 -2.2 compare
in planta xylem Xylemvessel barcodes Location 3 4 dpi (25 plantes) -3.6 -2.4 compare
in planta 1600 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together) -3.5 -3.4 compare
in planta xylem Xylemvessel barcodes Location 3 4 dpi (25 plantes) -3.5 -2.4 compare
in planta xylem Xylemvessel barcodes Location 2 4 dpi (25 plantes) -3.3 -3.9 compare
in planta xylem Xylemvessel barcodes Location 2 6 dpi (25 plantes) -3.1 -4.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -3.1 -3.6 compare
supernatant Supernatant; Xanthomonas campestris pv. campestris (strain 8004) and Pseudomonas fluorescens CFPB 13502 grown in 0.1x TSB, 0.4x -3.0 -4.0 compare
carbon source Pectin from apple 2 g/L (C) -3.0 -2.8 compare
in planta 1664 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together) -2.9 -2.0 compare
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days -2.9 -3.0 compare
control PBS control -2.9 -4.2 compare
supernatant Supernatant; Pseudomonas fluorescens CFPB 13502 grown in 0.1x TSB, 0.4x -2.8 -3.8 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X -2.8 -3.8 compare
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days -2.8 -3.7 compare
in planta 1648 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together) -2.7 -1.7 compare