Fitness data for Xcc-8004.3323.1 in Xanthomonas campestris pv. campestris strain 8004

transcriptional regulator protein Pai2
SEED: transcriptional regulator protein Pai2
KEGG: transcriptional regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
in planta xylem Xylemvessel barcodes Location 3 4 dpi (25 plantes) -1.2 -4.1 compare
in planta 1648 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together) -0.4 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.4 -2.0 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X -0.4 -1.9 compare
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days -0.4 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.4 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.3 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -1.5 compare
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=2_days -0.3 -1.6 compare
in planta 1664 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together) -0.3 -1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.3 -1.0 compare
carbon source Pectin from apple 2 g/L (C) -0.2 -1.6 compare
carbon source Citric Acid 16.67 mM (C) +0.2 +1.0 compare
in planta xylem Xylemvessel barcodes Location 3 4 dpi (25 plantes) +0.3 +1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 +1.4 compare
carbon source Citric Acid 10mM (C) +0.3 +1.3 compare
supernatant Supernatant; Xanthomonas campestris pv. campestris (strain 8004) grown in 0.1x TSB, 0.4x +0.3 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4 +1.4 compare
in planta xylem Xylemvessel barcodes Location 2 6 dpi (25 plantes) +0.5 +2.5 compare
in planta xylem Xylemvessel barcodes T0L1P3 +0.6 +2.1 compare