Fitness data for Xcc-8004.3293.1 in Xanthomonas campestris pv. campestris strain 8004

Histidine utilization repressor
SEED: Histidine utilization repressor
KEGG: GntR family transcriptional regulator, histidine utilization repressor

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source Citric Acid 16.67 mM (C) -1.4 -5.0 compare
in planta xylem Xylemvessel barcodes T0L2P4 -0.8 -2.9 compare
carbon source D-Glucose 16.67 mM (C) -0.6 -3.1 compare
in planta xylem Xylemvessel barcodes Location 2 6 dpi (25 plantes) -0.5 -2.1 compare
carbon source D-Fructose 16.67 mM (C) -0.4 -2.1 compare
moka MOKA -0.4 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.4 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.4 -1.5 compare
in planta 1600 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together) -0.4 -1.8 compare
xantho_mme_glucose_casamino Xantho_MME_glucose_casamino -0.4 -1.7 compare
clovis xylem sap Clovis xylem sap -0.4 -2.1 compare
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days -0.4 -1.2 compare
in planta xylem Xylemvessel barcodes T0L1P4 -0.4 -1.0 compare
xantho_mme_glucose_dropout_lth Xantho_MME_glucose_dropout_LTH -0.4 -2.0 compare
in planta xylem Xylemvessel barcodes T0L1P3 +0.3 +0.9 compare
xantho_mme_glucose_casamino Xantho_MME_glucose_casamino +0.3 +1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X +0.4 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4 +1.7 compare
in planta xylem Xylemvessel barcodes T1L3P4 +0.4 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.4 +1.7 compare