Fitness data for Xcc-8004.3188.1 in Xanthomonas campestris pv. campestris strain 8004

Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE
SEED: Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE
KEGG: heme exporter protein D

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
supernatant Supernatant; Pseudomonas fluorescens CFPB 13502 grown in 0.1x TSB, 0.4x -1.0 -2.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.0 -1.1 compare
in planta 1664 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together) -1.0 -2.2 compare
supernatant Supernatant; Xanthomonas campestris pv. campestris (strain 8004) and Pseudomonas fluorescens CFPB 13502 grown in 0.1x TSB, 0.4x -0.9 -2.2 compare
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days -0.8 -0.7 compare
control PBS control -0.8 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.7 -1.6 compare
in planta xylem Xylemvessel barcodes Location 3 6 dpi (25 plantes) -0.7 -1.0 compare
xantho_mme_glucose_dropout_lth Xantho_MME_glucose_dropout_LTH -0.6 -2.0 compare
supernatant Supernatant; Xanthomonas campestris pv. campestris (strain 8004) grown in 0.1x TSB, 0.4x -0.6 -2.1 compare
clovis xylem sap Clovis xylem sap -0.6 -1.5 compare
xantho_mme_glucose_casamino Xantho_MME_glucose_casamino -0.6 -2.0 compare
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=2_days -0.6 -1.3 compare
xantho_mme_glucose_dropout_lth Xantho_MME_glucose_dropout_LTH -0.6 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +1.4 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X +0.6 +2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.7 +0.8 compare
in planta 1648 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together) +0.8 +1.9 compare
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=2_days +0.8 +2.5 compare
in planta xylem Xylemvessel barcodes Location 3 4 dpi (25 plantes) +0.8 +1.4 compare