Fitness data for Xcc-8004.3058.1 in Xanthomonas campestris pv. campestris strain 8004

N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)
SEED: N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)
KEGG: N-acetylmuramoyl-L-alanine amidase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
in planta xylem Xylemvessel barcodes T0L1P4 -1.6 -3.4 compare
in planta xylem Xylemvessel barcodes Location 3 6 dpi (25 plantes) -1.0 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.9 -2.3 compare
in planta xylem Xylemvessel barcodes Location 3 4 dpi (25 plantes) -0.8 -1.9 compare
xantho_mme_glucose_casamino Xantho_MME_glucose_casamino -0.7 -2.5 compare
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days -0.6 -1.1 compare
supernatant Supernatant; Xanthomonas campestris pv. campestris (strain 8004) grown in 0.1x TSB, 0.4x -0.6 -1.9 compare
in planta xylem Xylemvessel barcodes Location 3 6 dpi (25 plantes) -0.6 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.5 -1.7 compare
r2a control R2A control -0.5 -1.8 compare
in planta xylem Xylemvessel barcodes Location 2 4 dpi (25 plantes) -0.5 -1.5 compare
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days -0.4 -1.0 compare
carbon source Pectin from apple 2 g/L (C) -0.4 -1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4 +0.9 compare
in planta 1648 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together) +0.4 +0.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +1.1 compare
in planta xylem Xylemvessel barcodes Location 2 6 dpi (25 plantes) +0.5 +1.5 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X +0.5 +1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +1.3 compare
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=2_days +0.6 +2.5 compare