Fitness data for Xcc-8004.2932.1 in Xanthomonas campestris pv. campestris strain 8004

putative; ORF located using Glimmer/Genemark
SEED: putative; ORF located using Glimmer/Genemark

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days -0.8 -3.1 compare
in planta xylem Xylemvessel barcodes Location 3 6 dpi (25 plantes) -0.6 -2.3 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X -0.5 -3.0 compare
in planta xylem Xylemvessel barcodes T0L2P4 -0.4 -1.5 compare
in planta xylem Xylemvessel barcodes T1L3P4 -0.4 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -1.7 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X -0.3 -2.0 compare
in planta 1664 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together) -0.3 -1.2 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X -0.3 -1.6 compare
in planta xylem Xylemvessel barcodes T0L1P3 -0.3 -0.9 compare
supernatant Supernatant; Pseudomonas fluorescens CFPB 13502 grown in 0.1x TSB, 0.4x -0.3 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.3 +1.5 compare
in planta 1600 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together) +0.3 +1.4 compare
xantho_mme_glucose_dropout_lth Xantho_MME_glucose_dropout_LTH +0.3 +1.6 compare
clovis xylem sap Clovis xylem sap +0.5 +2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.6 +2.6 compare
in planta xylem Xylemvessel barcodes Location 2 6 dpi (25 plantes) +0.6 +2.1 compare
in planta xylem Xylemvessel barcodes Location 2 4 dpi (25 plantes) +0.6 +2.8 compare
clovis xylem sap Clovis xylem sap +0.6 +3.1 compare
in planta xylem Xylemvessel barcodes Location 3 6 dpi (25 plantes) +0.7 +2.2 compare