Fitness data for Xcc-8004.2194.1 in Xanthomonas campestris pv. campestris strain 8004

Formate dehydrogenase chain D (EC 1.2.1.2)
SEED: Formate dehydrogenase chain D (EC 1.2.1.2)
KEGG: FdhD protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.1 -2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -1.6 compare
in planta xylem Xylemvessel barcodes Location 3 6 dpi (25 plantes) -0.5 -1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X -0.5 -1.4 compare
in planta 1664 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together) -0.4 -1.5 compare
carbon source D-Fructose 16.67 mM (C) -0.4 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.4 -1.1 compare
supernatant Supernatant; Xanthomonas campestris pv. campestris (strain 8004) and Pseudomonas fluorescens CFPB 13502 grown in 0.1x TSB, 0.4x -0.4 -1.6 compare
carbon source Pectin from apple 2 g/L (C) -0.4 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.4 -1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4 +1.7 compare
in planta xylem Xylemvessel barcodes Location 3 4 dpi (25 plantes) +0.5 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5 +1.0 compare
r2a control R2A control +0.6 +2.0 compare
in planta xylem Xylemvessel barcodes Location 2 4 dpi (25 plantes) +0.6 +2.4 compare
in planta xylem Xylemvessel barcodes Location 3 6 dpi (25 plantes) +0.6 +1.4 compare
in planta xylem Xylemvessel barcodes T0L2P4 +0.7 +1.7 compare
in planta 1648 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together) +0.7 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.8 +2.2 compare