Fitness data for Xcc-8004.2184.1 in Xanthomonas campestris pv. campestris strain 8004

Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain
SEED: Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
in planta xylem Xylemvessel barcodes Location 3 6 dpi (25 plantes) -0.6 -2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.4 -2.0 compare
in planta xylem Xylemvessel barcodes T0L1P3 -0.3 -1.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 -1.4 compare
carbon source Citric Acid 16.67 mM (C) -0.3 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.2 -1.2 compare
in planta xylem Xylemvessel barcodes Location 2 6 dpi (25 plantes) -0.2 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.2 -1.0 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X -0.2 -1.2 compare
in planta 1600 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together) -0.2 -1.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.2 +1.1 compare
supernatant Supernatant; Xanthomonas campestris pv. campestris (strain 8004) grown in 0.1x TSB, 0.4x +0.2 +1.3 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X +0.2 +1.3 compare
control PBS control +0.2 +1.5 compare
xantho_mme_glucose_casamino Xantho_MME_glucose_casamino +0.2 +1.3 compare
in planta xylem Xylemvessel barcodes T0L2P4 +0.2 +1.2 compare
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days +0.2 +1.0 compare
supernatant Supernatant; Xanthomonas campestris pv. campestris (strain 8004) and Pseudomonas fluorescens CFPB 13502 grown in 0.1x TSB, 0.4x +0.3 +1.7 compare
xantho_mme_glucose_casamino Xantho_MME_glucose_casamino +0.3 +2.0 compare