Fitness data for Xcc-8004.2180.1 in Xanthomonas campestris pv. campestris strain 8004

RND efflux system, membrane fusion protein CmeA
SEED: RND efflux system, membrane fusion protein CmeA
KEGG: membrane fusion protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
in planta 1664 hydathodes 6 dpi (Dna extract from 8 * 208 hydathodes and pooled together) -1.2 -6.3 compare
in planta 1648 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together) -0.8 -3.3 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X -0.8 -4.7 compare
in planta 1600 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together) -0.7 -3.4 compare
carbon source Citric Acid 16.67 mM (C) -0.6 -3.1 compare
in planta 1664 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together) -0.6 -3.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -2.7 compare
moka MOKA -0.5 -3.3 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X -0.4 -2.6 compare
moka MOKA -0.4 -3.0 compare
in planta xylem Xylemvessel barcodes T0L2P4 -0.4 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -2.1 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X -0.4 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.4 -2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 -1.9 compare
supernatant Supernatant; Xanthomonas campestris pv. campestris (strain 8004) and Pseudomonas fluorescens CFPB 13502 grown in 0.1x TSB, 0.4x -0.3 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.3 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.6 +3.2 compare
carbon source Citric Acid 10mM (C) +0.6 +4.1 compare