Fitness data for Xcc-8004.2129.1 in Xanthomonas campestris pv. campestris strain 8004

1-pyrroline-4-hydroxy-2-carboxylate deaminase (EC 3.5.4.22)
SEED: 1-pyrroline-4-hydroxy-2-carboxylate deaminase (EC 3.5.4.22)
KEGG: dihydrodipicolinate synthase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X -0.7 -3.0 compare
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=2_days -0.5 -3.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.5 -2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.5 -1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -2.1 compare
clovis xylem sap Clovis xylem sap -0.4 -2.5 compare
moka MOKA -0.4 -2.5 compare
supernatant Supernatant; Xanthomonas campestris pv. campestris (strain 8004) grown in 0.1x TSB, 0.4x -0.3 -1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 -1.9 compare
in planta 1664 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together) -0.3 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.3 -1.6 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X -0.3 -2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 -1.4 compare
xantho_mme_glucose_dropout_lth Xantho_MME_glucose_dropout_LTH -0.3 -1.7 compare
xantho_mme_glucose_dropout_lth Xantho_MME_glucose_dropout_LTH -0.3 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 +1.3 compare
in planta xylem Xylemvessel barcodes T0L1P3 +0.4 +1.3 compare
in planta xylem Xylemvessel barcodes Location 3 6 dpi (25 plantes) +0.4 +1.3 compare
in planta xylem Xylemvessel barcodes Location 3 4 dpi (25 plantes) +0.4 +1.4 compare
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days +0.5 +1.5 compare