Fitness data for Xcc-8004.1841.1 in Xanthomonas campestris pv. campestris strain 8004

DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13)
SEED: DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13)
KEGG: ATP-dependent RNA helicase DeaD

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
in planta xylem Xylemvessel barcodes T0L2P4 -2.4 -3.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.7 -3.8 compare
in planta xylem Xylemvessel barcodes T0L1P4 -1.7 -3.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.7 -2.7 compare
in planta xylem Xylemvessel barcodes T0L1P3 -1.6 -2.6 compare
carbon source Citric Acid 16.67 mM (C) -1.6 -2.7 compare
supernatant Supernatant; Xanthomonas campestris pv. campestris (strain 8004) grown in 0.1x TSB, 0.4x -1.6 -3.6 compare
in planta xylem Xylemvessel barcodes T1L3P4 -1.4 -2.0 compare
in planta xylem Xylemvessel barcodes Location 2 6 dpi (25 plantes) -1.4 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.4 -2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.3 -2.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.2 -2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.2 -2.0 compare
supernatant Supernatant; Xanthomonas campestris pv. campestris (strain 8004) and Pseudomonas fluorescens CFPB 13502 grown in 0.1x TSB, 0.4x -1.1 -2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.1 -2.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.0 -2.0 compare
control PBS control -1.0 -2.5 compare
supernatant Supernatant; Pseudomonas fluorescens CFPB 13502 grown in 0.1x TSB, 0.4x -1.0 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.9 -1.4 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X +1.0 +3.7 compare