Fitness data for Xcc-8004.1795.1 in Xanthomonas campestris pv. campestris strain 8004

RND efflux system, outer membrane lipoprotein CmeC
SEED: RND efflux system, outer membrane lipoprotein CmeC

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days -1.4 -2.8 compare
in planta xylem Xylemvessel barcodes Location 3 6 dpi (25 plantes) -0.9 -2.1 compare
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=2_days -0.6 -1.9 compare
supernatant Supernatant; Xanthomonas campestris pv. campestris (strain 8004) and Pseudomonas fluorescens CFPB 13502 grown in 0.1x TSB, 0.4x -0.5 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.5 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -1.5 compare
in planta xylem Xylemvessel barcodes Location 3 4 dpi (25 plantes) -0.5 -1.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.4 -0.8 compare
in planta xylem Xylemvessel barcodes Location 2 6 dpi (25 plantes) -0.4 -1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +1.3 compare
xantho_mme_glucose_casamino Xantho_MME_glucose_casamino +0.4 +1.1 compare
in planta xylem Xylemvessel barcodes Location 3 6 dpi (25 plantes) +0.4 +0.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.2 compare
in planta 1664 hydathodes 6 dpi (Dna extract from 8 * 208 hydathodes and pooled together) +0.4 +1.2 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X +0.6 +1.8 compare
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days +0.6 +1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X +0.6 +2.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.7 +2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.7 +1.5 compare