Fitness data for Xcc-8004.1348.1 in Xanthomonas campestris pv. campestris strain 8004

Type IV pilin PilA
SEED: Type IV pilin PilA
KEGG: type IV pilus assembly protein PilA

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source Citric Acid 16.67 mM (C) -1.4 -7.5 compare
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days -1.2 -5.9 compare
in planta 1664 hydathodes 6 dpi (Dna extract from 8 * 208 hydathodes and pooled together) -1.1 -6.7 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X -1.0 -6.1 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X -0.9 -5.1 compare
carbon source Citric Acid 10mM (C) -0.8 -4.8 compare
in planta 1648 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together) -0.8 -4.5 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X -0.7 -4.4 compare
in planta xylem Xylemvessel barcodes Location 2 6 dpi (25 plantes) -0.6 -3.9 compare
in planta xylem Xylemvessel barcodes Location 3 4 dpi (25 plantes) -0.6 -2.9 compare
in planta 1664 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together) -0.6 -3.5 compare
in planta xylem Xylemvessel barcodes Location 2 4 dpi (25 plantes) -0.5 -3.2 compare
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=2_days -0.5 -3.5 compare
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days -0.5 -2.3 compare
in planta xylem Xylemvessel barcodes Location 2 6 dpi (25 plantes) -0.5 -2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.4 +2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +3.2 compare
carbon source D-Glucose 16.67 mM (C) +0.5 +3.8 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X +0.5 +4.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.6 +3.9 compare