Fitness data for Xcc-8004.1224.1 in Xanthomonas campestris pv. campestris strain 8004

Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB
SEED: Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB
KEGG: oxygen-independent coproporphyrinogen III oxidase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source Citric Acid 16.67 mM (C) -2.4 -6.8 compare
in planta xylem Xylemvessel barcodes Location 3 4 dpi (25 plantes) -1.2 -3.0 compare
in planta xylem Xylemvessel barcodes T0L1P3 -1.1 -3.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.9 -2.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.7 -2.0 compare
in planta xylem Xylemvessel barcodes Location 2 4 dpi (25 plantes) -0.6 -2.2 compare
moka MOKA -0.6 -2.9 compare
in planta 1600 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together) -0.6 -2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X -0.5 -1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -1.3 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -0.5 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.5 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.4 -1.4 compare
moka MOKA -0.4 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.4 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.4 -1.4 compare
xantho_mme_glucose_casamino Xantho_MME_glucose_casamino -0.3 -1.9 compare
in planta xylem Xylemvessel barcodes Location 3 6 dpi (25 plantes) +0.4 +1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.4 compare