Fitness data for Xcc-8004.1026.1 in Xanthomonas campestris pv. campestris strain 8004

Tricarboxylate transport transcriptional regulator TctD
SEED: Tricarboxylate transport transcriptional regulator TctD
KEGG: two-component system, OmpR family, response regulator TctD

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
in planta xylem Xylemvessel barcodes Location 3 4 dpi (25 plantes) -3.0 -3.8 compare
in planta xylem Xylemvessel barcodes Location 3 6 dpi (25 plantes) -3.0 -4.1 compare
carbon source Citric Acid 10mM (C) -2.5 -4.0 compare
carbon source Citric Acid 16.67 mM (C) -2.4 -3.4 compare
in planta xylem Xylemvessel barcodes Location 2 6 dpi (25 plantes) -2.3 -4.2 compare
in planta xylem Xylemvessel barcodes Location 3 4 dpi (25 plantes) -1.9 -2.4 compare
in planta xylem Xylemvessel barcodes Location 3 6 dpi (25 plantes) -1.6 -2.4 compare
in planta xylem Xylemvessel barcodes Location 2 6 dpi (25 plantes) -1.4 -3.4 compare
in planta xylem Xylemvessel barcodes Location 2 4 dpi (25 plantes) -1.2 -1.9 compare
in planta 1600 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together) -1.1 -2.4 compare
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days -1.0 -1.4 compare
in planta 1648 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together) -1.0 -1.5 compare
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=2_days -0.9 -2.0 compare
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days -0.9 -1.7 compare
in planta xylem Xylemvessel barcodes Location 2 6 dpi (25 plantes) -0.8 -1.1 compare
carbon source Pectin from apple 2 g/L (C) -0.8 -2.4 compare
in planta xylem Xylemvessel barcodes Location 2 4 dpi (25 plantes) -0.7 -2.2 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X -0.7 -1.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.8 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.8 +2.3 compare