Fitness data for SMa0163 in Sinorhizobium meliloti 1021

PilQ2 pilus assembly protein
SEED: Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly
KEGG: pilus assembly protein CpaC

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
nitrogen source NAG (N) -0.3 -1.7 compare
carbon source Lactitol (C) -0.3 -1.6 compare
lb no stress control LB no stress control -0.2 -1.4 compare
stress copper (II) chloride 1 mM -0.2 -1.4 compare
stress 6-Pentyl-2H-pyran-2-one 0.385649 mM -0.2 -1.7 compare
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI -0.2 -1.4 compare
stress 1-octen-3-ol 0.5427293333 mM -0.2 -1.3 compare
nutrient L-Histidine -0.2 -1.3 compare
stress D-Cycloserine 0.05 mg/ml +0.2 +0.8 compare
temperature LB, 23C +0.2 +1.4 compare
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) +0.2 +1.4 compare
temperature LB, 23C +0.2 +1.5 compare
stress perchlorate 10 mM +0.2 +0.9 compare
carbon source Fumarate (C) +0.2 +1.8 compare
pH LB, pH6 +0.2 +0.8 compare
carbon source 5-Aminovaleric (C) +0.3 +1.9 compare
pH LB, pH6 +0.3 +0.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 +1.3 compare
stress Paraquat dichloride 0.05 mg/ml +0.3 +1.8 compare
stress Polymyxin B sulfate 0.00005 mg/ml +0.4 +1.7 compare