Fitness data for PFLU_RS29955 in Pseudomonas fluorescens SBW25-INTG

RNA polymerase-binding protein DksA
SEED: C4-type zinc finger protein, DksA/TraR family
KEGG: DnaK suppressor protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.1)


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group condition fitness t score  
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -2.0 -2.4 compare
no stress control D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS -1.7 -3.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.5 -2.8 compare
nitrogen source NAG (N); with MOPS -1.5 -2.7 compare
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -1.4 -2.6 compare
carbon source 4-Acetoxy-3-methoxycinnamic 2 mM (C) -1.4 -2.7 compare
stress L-Glutamine (C)(N); with MOPS; with chloride -1.4 -3.2 compare
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride -1.4 -2.2 compare
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -1.3 -1.8 compare
carbon source Xanthosine (C) -1.3 -2.1 compare
stress Betaine (C)(N); with TAPS; with chloride -1.2 -1.7 compare
stress L-Glutamine (C)(N); with MOPS; with chloride -1.1 -2.4 compare
carbon source 4-Guanidinobutyric (C) -1.1 -2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -1.1 -1.4 compare
stress Glucose (C) and Betaine (N); with TAPS; with chloride -1.1 -1.7 compare
pH Growth at pH9 and (C) D-Glucose -1.1 -2.0 compare
no stress control L-Glutamine (C)(N); with MOPS +1.2 +2.2 compare
stress Betaine (C)(N); with TAPS; with chloride +1.3 +2.1 compare
carbon source p-Coumaric 2 mM (C) +1.3 +2.7 compare
stress Betaine (C)(N); with MOPS; with chloride +1.4 +2.3 compare