Fitness data for PFLU_RS24340 in Pseudomonas fluorescens SBW25-INTG

sigma-70 family RNA polymerase sigma factor
SEED: FIG006045: Sigma factor, ECF subfamily

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride -2.4 -5.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -2.3 -4.7 compare
stress Betaine (C)(N); with TAPS; with chloride -1.8 -3.3 compare
carbon source 4-hydroxyphenylacetic 2 mM (C) -1.6 -4.0 compare
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride -1.5 -3.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.3 -2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -1.1 -2.1 compare
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -1.1 -2.0 compare
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS -1.0 -3.1 compare
carbon source Shikimic Acid (C) -1.0 -2.1 compare
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride -1.0 -1.6 compare
carbon source L-Valine (C) -0.9 -1.9 compare
carbon source succinate (C); with MOPS -0.9 -3.2 compare
no stress control Sucrose (C) and L-Glutamine (N); with MOPS +0.9 +3.5 compare
temperature shift Temperature shift 30_to_34 +0.9 +4.7 compare
stress Betaine (C)(N); with TAPS; with chloride +0.9 +2.4 compare
carbon source Phloretic Acid 2 mM (C) +1.0 +2.5 compare
carbon and nitrogen source NAG carbon and (N) +1.0 +2.8 compare
temperature Growth at 30C +1.0 +2.8 compare
nitrogen source nitrate (N) +1.1 +4.7 compare