Fitness data for PFLU_RS22800 in Pseudomonas fluorescens SBW25-INTG

gamma-butyrobetaine hydroxylase
SEED: Gamma-butyrobetaine,2-oxoglutarate dioxygenase (EC 1.14.11.1)
KEGG: gamma-butyrobetaine dioxygenase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source 4-Aminobutyric (C) -0.7 -4.0 compare
stress Betaine (C)(N); with MOPS; with chloride -0.5 -3.3 compare
no stress control Glycine betaine (C)(N); with MOPS -0.5 -2.7 compare
pH Growth at pH9 and (C) Trisodium citrate -0.5 -2.6 compare
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride -0.4 -2.5 compare
carbon source 4-Acetoxy-3-methoxycinnamic 2 mM (C) -0.4 -2.6 compare
carbon source L-Ornithine 10 mM (C) -0.3 -2.4 compare
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS -0.3 -2.2 compare
carbon source L-tyrosine 10 mM (C) -0.3 -2.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.3 -1.8 compare
nitrogen source nitrate (N); with MOPS +0.3 +1.9 compare
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.3 +1.9 compare
carbon source L-Valine (C) +0.3 +1.9 compare
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride +0.3 +2.3 compare
stress Betaine (C)(N); with TAPS; with chloride +0.3 +2.1 compare
stress Betaine (C)(N); with TAPS; with chloride +0.4 +2.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.4 +1.8 compare
carbon source Ferulic Acid (C) 1.5 mM +0.4 +2.7 compare
stress Betaine (C)(N); with MOPS; with chloride +0.4 +2.6 compare
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride +0.4 +2.5 compare