Fitness data for PFLU_RS22790 in Pseudomonas fluorescens SBW25-INTG

choline ABC transporter substrate-binding protein
SEED: L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1)
KEGG: glycine betaine/proline transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source Phloretic Acid 2 mM (C) -0.5 -2.4 compare
no stress control Glucose (C) and L-Glutamine (N); with MOPS -0.4 -3.1 compare
temperature Growth at 25C -0.3 -1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.3 -2.0 compare
temperature Growth at 30C -0.3 -1.8 compare
carbon source L-Arabinose (C); with MOPS -0.3 -1.8 compare
temperature shift Temperature shift 10_to_25; with MOPS -0.3 -1.6 compare
pH Growth at pH9 and (C) D-Glucose +0.3 +1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.3 +1.6 compare
carbon source p-Coumaric 2 mM (C) +0.3 +1.6 compare
stress Betaine (C)(N); with MOPS; with chloride +0.3 +1.6 compare
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride +0.3 +1.7 compare
carbon source Phloretic Acid 2 mM (C) +0.3 +1.7 compare
carbon source Ferulic Acid 2 mM (C) +0.3 +2.5 compare
carbon source Shikimic Acid (C) +0.4 +1.9 compare
carbon source L-Valine 10 mM (C) +0.4 +2.2 compare
carbon source L-Valine (C) +0.4 +2.2 compare
carbon source acetate 30 mM (C) +0.4 +2.6 compare
carbon source 4-Aminobutyric (C) +0.4 +2.1 compare
carbon source 4-Hydroxybenzoic Acid 2 mM (C) +0.5 +3.3 compare