Fitness data for PFLU_RS18560 in Pseudomonas fluorescens SBW25-INTG

cold shock domain-containing protein CspD
SEED: Cold shock protein CspD
KEGG: cold shock protein (beta-ribbon, CspA family)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


Add gene:

Or see all 1213 experiments or choose conditions

group condition fitness t score  
no stress control D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS -1.7 -4.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -1.6 -3.4 compare
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride -1.2 -3.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.1 -2.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -1.1 -2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.1 -2.6 compare
carbon source p-Coumaric 2 mM (C) -1.1 -2.8 compare
stress Betaine (C)(N); with MOPS; with chloride -1.0 -3.3 compare
carbon source propionate (C) -0.9 -3.3 compare
no stress control p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.8 -2.3 compare
carbon and nitrogen source NAG carbon and (N) -0.8 -2.7 compare
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride -0.8 -2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.8 -2.8 compare
carbon source Phloretic Acid 2 mM (C) -0.8 -1.9 compare
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.8 -2.0 compare
carbon source 2-Deoxy-D-Ribose 10 mM (C) -0.7 -1.8 compare
stress L-Glutamine (C)(N); with MOPS; with chloride -0.7 -3.2 compare
temperature Growth at 34C; with MOPS +0.7 +2.9 compare
carbon source L-Ornithine 10 mM (C) +0.8 +2.7 compare
carbon source L-Valine 10 mM (C) +0.8 +2.4 compare