Fitness data for PFLU_RS14510 in Pseudomonas fluorescens SBW25-INTG

DNA oxidative demethylase AlkB
SEED: Alkylated DNA repair protein AlkB
KEGG: alkylated DNA repair protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


Add gene:

Or see all 1213 experiments or choose conditions

group condition fitness t score  
carbon source 4-Aminobutyric (C) -1.2 -3.4 compare
stress Betaine (C)(N); with MOPS; with chloride -1.2 -3.3 compare
carbon source 2-Deoxy-D-Ribose 10 mM (C) -1.0 -3.6 compare
carbon source 4-Guanidinobutyric (C) -1.0 -3.3 compare
stress Betaine (C)(N); with MOPS; with chloride -1.0 -3.3 compare
stress Betaine (C)(N); with MOPS; with chloride -0.8 -3.0 compare
stress Glucose (C) and Betaine (N); with TAPS; with chloride -0.7 -2.8 compare
carbon source 4-Guanidinobutyric (C) -0.7 -3.4 compare
carbon source Xanthosine (C) -0.7 -2.2 compare
carbon source acetate (C) -0.6 -2.5 compare
carbon and nitrogen source NAG carbon and (N) -0.6 -2.7 compare
carbon source Fumarate (C) -0.6 -3.0 compare
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride +0.6 +2.7 compare
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS +0.6 +2.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.7 +2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.7 +2.7 compare
stress Betaine (C)(N); with TAPS; with chloride +0.7 +2.7 compare
carbon source L-Valine (C) +0.8 +3.0 compare
pH Growth at pH9 and (C) Trisodium citrate +0.9 +3.0 compare
carbon source L-Valine (C) +0.9 +3.4 compare