Fitness data for PFLU_RS13600 in Pseudomonas fluorescens SBW25-INTG

sigma-70 family RNA polymerase sigma factor
SEED: RNA polymerase sigma-70 factor, ECF subfamily
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -1.6 -4.0 compare
carbon source Quinic Acid (C) -1.5 -3.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -1.3 -2.5 compare
pH Growth at pH8 and (C) Trisodium citrate -1.2 -2.1 compare
carbon source NAG (C) -1.1 -3.3 compare
carbon source L-Carnitine (C) -1.0 -2.2 compare
carbon source Inosine (C) -1.0 -2.1 compare
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride -1.0 -2.1 compare
pH Growth at pH9 and (C) Trisodium citrate -0.9 -1.6 compare
temperature shift Temperature shift 30_to_25; with MOPS -0.9 -2.8 compare
carbon source L-Valine (C) -0.9 -1.9 compare
carbon source 4-Guanidinobutyric (C) -0.9 -2.0 compare
carbon source D,L-Malic Acid (C) -0.9 -2.3 compare
temperature shift Temperature shift 10_to_25 -0.9 -3.1 compare
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.9 -2.0 compare
no stress control Glucose (C) and Ammonium chloride (N); with TAPS -0.8 -2.5 compare
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.8 -1.5 compare
pH Growth at pH8 and (C) D-Glucose -0.8 -3.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.9 +1.9 compare
no stress control p-Coumaric (C) and Ammonium chloride (N); with TAPS +1.3 +3.2 compare