Fitness data for PFLU_RS12745 in Pseudomonas fluorescens SBW25-INTG

RNA polymerase sigma factor
SEED: RNA polymerase sigma factor RpoE
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
stress L-Glutamine (C)(N); with MOPS; with chloride -0.9 -2.2 compare
carbon source L-Valine 10 mM (C) -0.9 -2.3 compare
carbon source 4-Aminobutyric (C) -0.9 -1.8 compare
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.9 -2.0 compare
no stress control D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS -0.9 -2.7 compare
carbon source L-Proline (C) 10 mM -0.9 -3.6 compare
stress Betaine (C)(N); with TAPS; with chloride -0.8 -1.7 compare
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.8 -2.2 compare
stress Betaine (C)(N); with MOPS; with chloride -0.8 -1.9 compare
carbon source Xanthosine (C) -0.7 -1.8 compare
carbon source sn-glycero-3-phosphocholine 10 mM (C) -0.7 -2.9 compare
carbon source a-Ketoglutaric 10 mM (C) +0.7 +2.8 compare
no stress control 4-Hydroxybenzoic Acid (C) and Ammonium chloride (N); with MOPS +0.7 +1.7 compare
stress L-Glutamine (C)(N); with TAPS; with chloride +0.8 +2.8 compare
carbon source 4-Guanidinobutyric (C) +0.8 +2.9 compare
no stress control Glycine betaine (C)(N); with MOPS +0.8 +2.0 compare
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM +0.9 +3.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.9 +2.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +1.0 +2.6 compare
carbon source Inosine (C) +1.1 +3.3 compare