D-ribose pyranase
SEED: Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1)
KEGG: D-ribose pyranase
Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.5)
Or see all 337 experiments or choose conditions
| group | condition | fitness | t score | |
|---|
| carbon source | D-Ribose (C) | -2.3 | -7.1 | compare |
| nitrogen source | Carnitine Hydrochloride (N) | -1.5 | -2.7 | compare |
| in planta | Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4 | +1.5 | +4.2 | compare |
| mixed community | 0.1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_109 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | +1.5 | +3.1 | compare |
| mixed community | 1X LB plate, Mixed culture; Bacillus haynesii TBS_113 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | +1.5 | +1.4 | compare |
| mixed community | 0.1X LB plate, 1:1 coculture with Paenibacillus lautus TBS_090 | +1.6 | +3.3 | compare |
| in planta | Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4 | +1.7 | +3.7 | compare |
| mixed community | 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_051 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | +1.7 | +5.0 | compare |
| mixed community | TSB plate, 1:1 coculture with Flavobacterium anhuiense SO6b | +1.8 | +3.1 | compare |
| mixed community | 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_104 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | +1.9 | +3.5 | compare |
| mixed community | 0.1X LB plate, Mixed culture; Bacillus haynesii TBS_113 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | +1.9 | +3.6 | compare |
| mixed community | 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct | +1.9 | +2.7 | compare |
| mixed community | 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_099 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | +2.0 | +3.3 | compare |
| in planta | Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5 | +2.0 | +3.6 | compare |
| mixed community | M9 plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | +2.1 | +2.1 | compare |
| mixed community | 0.1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_055 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | +2.2 | +4.3 | compare |
| mixed community | 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_103 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | +2.3 | +4.7 | compare |
| mixed community | TSB plate, 1:1 coculture with Paenibacillus lautus TBS_090 | +2.5 | +5.1 | compare |
| mixed community | 0.1X LB plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | +2.6 | +3.9 | compare |
| mixed community | 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_065 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | +3.1 | +5.7 | compare |