Fitness data for MPMX20_04618 in Enterobacter sp. TBS_079

Ribose import ATP-binding protein RbsA
SEED: Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)
KEGG: ribose transport system ATP-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source D-Ribose (C) -2.1 -12.9 compare
mixed community AMD2036 coinoculated with AMD2590 on RCH2 to a starting OD of 0.001 -0.4 -2.5 compare
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4 -0.4 -2.3 compare
supernatant mutant library grown in Supernatant; Pseudomonas frederiksbergensis TBS_004 grown in LB -0.4 -3.3 compare
mixed community 1X LB plate, 1:1 coculture with Sphingobium xenophagum Sin1 -0.4 -2.4 compare
supernatant mutant library grown in Supernatant; Inquilinus sp. 005-A5 grown in LB -0.4 -2.9 compare
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5 -0.4 -2.2 compare
mixed community TSB plate, 1:1 coculture with Bacillus megaterium TBS_037 -0.4 -2.4 compare
mixed community AMD2036 coinoculated with AMD2587 on TSA to a starting OD of 0.001 -0.3 -1.4 compare
supernatant mutant library grown in Supernatant; Inquilinus sp. 005-A5 grown in LB -0.3 -2.6 compare
carbon source octanoate (C) +0.3 +1.4 compare
nitrogen source Beta-Lactose (N) +0.3 +2.1 compare
nitrogen source D-Alanine (N) +0.3 +2.2 compare
mixed community TSB plate, 1:1 coculture with Enterobacter ludwigii PH2 +0.4 +1.2 compare
carbon source L-Lactate (C) +0.4 +2.4 compare
mixed community 1X LB plate, 1:1 coculture with Pseudomonas lini TBS_031 +0.4 +2.4 compare
mixed community 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_117 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.4 +2.1 compare
mixed community M9 plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.5 +2.3 compare
mixed community 1X LB plate, Mixed culture; Streptomyces sp. SAI_117 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.6 +2.0 compare
mixed community TSB plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.8 +3.2 compare