Very short patch repair protein
SEED: Very-short-patch mismatch repair endonuclease (G-T specific)
KEGG: DNA mismatch endonuclease, patch repair protein
Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)
Or see all 337 experiments or choose conditions
| group | condition | fitness | t score | |
|---|
| mixed community | 0.1X LB plate, 1:1 coculture with Paenibacillus lautus TBS_090 | -1.2 | -4.3 | compare |
| in planta | Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5 | -0.8 | -2.4 | compare |
| carbon source | L-Lactate (C) | -0.6 | -2.1 | compare |
| carbon source | Itaconic Acid (C) | -0.6 | -2.2 | compare |
| nitrogen source | Beta-Lactose (N) | -0.6 | -2.4 | compare |
| mixed community | 0.1X LB plate, 1:1 coculture with Bacillus megaterium TBS_037 | -0.5 | -2.4 | compare |
| mixed community | 0.1X LB plate, Mixed culture; Streptomyces ossamyceticus SAI_001 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | -0.5 | -2.3 | compare |
| mixed community | TSB plate, Mixed culture; Bacillus zanthoxyli TBS_109 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | +0.5 | +2.3 | compare |
| mixed community | 0.1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | +0.6 | +2.1 | compare |
| mixed community | AMD2036 coinoculated with AMD2590 on RCH2 to a starting OD of 0.001 | +0.6 | +2.0 | compare |
| carbon source | L-Rhamnose (C) | +0.6 | +2.5 | compare |
| mixed community | AMD2036 coinoculated with AMD2910 on LB to a starting OD of 0.001 | +0.6 | +1.8 | compare |
| mixed community | M9 plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | +0.7 | +1.9 | compare |
| mixed community | 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_065 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | +0.8 | +1.5 | compare |
| mixed community | 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_104 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | +0.8 | +1.9 | compare |
| mixed community | AMD2036 coinoculated with AMD2587 on TSA to a starting OD of 0.001 | +0.8 | +2.3 | compare |
| mixed community | 0.1X LB plate, 1:1 coculture with Agromyces sp. SAI_196 | +0.8 | +2.2 | compare |
| mixed community | 0.1X LB plate, 1:1 coculture with Microbacterium jejuense SAI_031 | +0.9 | +1.9 | compare |
| mixed community | M9 plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | +0.9 | +1.5 | compare |
| mixed community | TSB plate, 1:1 coculture with Brevibacillus agri TBS_043 | +1.4 | +2.1 | compare |